MY PUBLICATIONS

50. Identification of genomic regions associated with resistance to blackleg (Leptosphaeria maculans) in canola using genome wide association study. European Journal of Plant Pathology. (link​)

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49.Four chromosome-scale genomes and a pan-genome annotation to accelerate pecan tree breeding. Nature Communications 12:4125 (link)

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48. Genetic dissection of natural variation in oilseed traits of camelina by whole-genome resequencing and QTL mapping. The Plant Genome 14:e20110 (link)

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47. Genome sequences of wild and landrace tepary bean provide insight into evolution and domestication under heat stress. Nature communications 12: 2638 (link)

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46. Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass. Nature. 590: 438–444 (link)

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45. Genome-wide association studies revealed novel stripe rust resistance QTL in barley at seedling and adult-plant stages. Euphytica 217:3  (link)

44. A genome resource for green millet Setaria viridis enables discovery of agronomically valuable loci. Nature Biotechnology 38: 1203–1210 (link)

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43. A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa. Genome Biology 21:259. (link)

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42. Genetic dissection of Fusarium head blight resistance in spring wheat cv. ‘Glenn’. Euphytica 216:71. (link)

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41. Genome-wide analysis of the transcriptional response to drought stress in root and leaf of common bean. Genetics and Molecular Biology 43, e20180259. (link)

40. The genomic landscape of molecular responses to natural drought stress in Panicum hallii. Nature Communications 9:5213. (link)

39. Population genomics and climate adaptation of a C4 perennial grass, Panicum hallii (Poaceae). BMC Genomics 19:792. (link)

38.  Genome-wide association study for frost tolerance in rapeseed/canola (Brassica napus L.) under field condition. Journal of Plant Biochemistry and Biotechnology. (link)

37. White seed color in common bean (Phaseolus vulgaris) results from convergent evolution in the P (pigment) gene.  New Phytologist 219: 1112-1123.(link)

36. Flaxseed Consumption Inhibits Chemically Induced Lung Tumorigenesis and Modulates Expression of Phase II Enzymes and Inflammatory Cytokines in A/J Mice. Cancer Prevention Research 11: 27-37. (link)

35. Piperlongumine potentiates the effects of gemcitabine in in vitro and in vivo human pancreatic cancer models. Oncotarget 9:10457-10469.(link)

34. Genetic Architecture of Dietary Fiber and Oligosaccharide Content in a Middle American Panel of Edible Dry Bean. The Plant Genome 11 (1). (link)

33.  Molecular and phenotypic diversity of ICARDA spring barley (Hordeum vulgare L.) collection. Genetic Resources and Crop Evolution 65: 255-269.(link)

32. Genome-wide association study of heat stress-tolerance traits in spring-type Brassica napus L. under controlled conditions. The Crop Journal 6 (2): 115-125. (link)

31.  Genetic Architecture of Flooding Tolerance in the Dry Bean Middle-American Diversity Panel. Frontiers in Plant Science 8: 1183. (link)

30. Association mapping of agronomic traits of canola (Brassica napus L.) subject to heat stress under field conditions (2017). Australian Journal of Crop Science 11: 1094. (link)

29. Enterolactone induces G1-phase cell cycle arrest in nonsmall cell lung cancer cells by downregulating cyclins and cyclin-dependent kinases. Nutrition and cancer 69: 652-662. (link)

28. Genetic Analysis of Flooding Tolerance in an Andean Diversity Panel of Dry Bean (Phaseolus vulgaris L.). Frontiers in Plant Science 9. (link)

27. QTL mapping for root vigor and days to flowering in Brassica napus L. Canadian Journal of Plant Science 97: 99-109. (link)

26. Genome-Wide Association Study Identifies Candidate Loci Underlying Agronomic Traits in a Middle American Diversity Panel of Common Bean (Phaseolus vulgaris L.). The Plant Genome 9 (3). (link)

25. Identification and validation of a major cadmium accumulation locus and closely associated SNP markers in North Dakota durum wheat cultivars. Molecular Breeding 36 :112. (link)

24. Association mapping in Brassica napus (L.) accessions identifies a major QTL for blackleg disease resistance on chromosome A01. Molecular Breeding 36:90. (link)

23. Sequence-Based Introgression Mapping Identifies Candidate White Mold Tolerance Genes in Common Bean. The Plant Genome 9 (2). (link) 

22. Transcriptome Analysis of Piperlongumine-Treated Human Pancreatic Cancer Cells Reveals Involvement of Oxidative Stress and Endoplasmic Reticulum Stress Pathways. Journal of medicinal food 19: 578–585. (link)

21. Optimization of genotyping by sequencing (GBS) data in common bean (Phaseolus vulgaris L.). Molecular Breeding 36: 1-9. (link)

20. Expression of drought tolerance genes in tropical upland rice cultivars (Oryza sativa). Genet Mol Res 14: 8181-8200. (link)

19. Genome-wide association mapping for resistance to leaf and stripe rust in winter-habit hexaploid wheat landraces. PloS One 10: e0129580. (link)

18. Mapping of new quantitative trait loci (QTL) for resistance to Septoria tritici blotch in spring wheat (Triticum aestivum L.). Euphytica 205: 699-706. (link)

17. Association mapping of seedling resistance to spot form net blotch in a worldwide collection of barley.  Phytopathology 105: 500-508. (link)

16. Genome-wide association study reveals novel quantitative trait Loci associated with resistance to multiple leaf spot diseases of spring wheat. PLoS One 9: e108179. (link)

15. Genome-wide association studies identifies seven major regions responsible for iron deficiency chlorosis in soybean (Glycine max). PLoS One 9: e107469. (link)

 
14.  A reference genome for common bean and genome-wide analysis of dual domestications. Nature Genetics 46: 707-713. (link)

13. Genetic diversity and population structure among pea (Pisum sativum L.) cultivars as revealed by simple sequence repeat and novel genic markers. Molecular Biotechnology 56: 925-938. (link) 

12. Developing market class specific InDel markers from next generation sequence data in Phaseolus vulgaris L. Frontiers in Plant Science 5: 185. (link) 

11. Quantitative trait loci mapping of seed colour, hairy leaf, seedling anthocyanin, leaf chlorosis and days to flowering in F2 population of Brassica rapa L. Plant Breeding 133: 381-389. (link)

10. Demographic factors shaped diversity in the two gene pools of wild common bean Phaseolus vulgaris L. Heredity 110: 267-276. (link)

9. Identification of QTL in Spring Wheat Associated with Resistance to a Novel Isolate of of Pyrenophora tritici-repentis in spring wheat. Crop Science 53: 842-852. (link)

8. Population structure and linkage disequilibrium in Lupinus albus L. germplasm and its implication for association mapping. Theoretical and Applied Genetics 125: 517-530. (link)

7. Population structure and genetic differentiation among the USDA common bean (Phaseolus vulgaris L.) core collection. Genetic Resources and Crop Evolution 59: 499-515. (link)

6.  Investigation of the domestication of common bean (Phaseolus vulgaris) using multilocus sequence data. Functional Plant Biology 38: 953-967. (link)

5. Genome-wide association analysis identifies candidate genes associated with iron deficiency chlorosis in soybean. The Plant Genome 4: 154-164. (link)

 
4.  Mixed model association mapping for Fusarium head blight resistance in Tunisian-derived durum wheat populations. G3: Genes, Genomes, Genetics 1: 209-218. (link) 

3.  Identification of novel genomic regions associated with resistance to Pyrenophora tritici-repentis races 1 and 5 in spring wheat landraces using association analysis. Theoretical and Applied Genetics 123: 1029-1041. (link)

2. Syntenic relationships among legumes revealed using a gene-based genetic linkage map of common bean (Phaseolus vulgaris L.). Theoretical and Applied Genetics 121: 1103-1116. (link)

1. Synteny mapping between common bean and soybean reveals extensive blocks of shared loci. BMC Genomics 11:184. (link)

2016:
8. Modified screening method reveals partial Anthracnose resistance to race 73 in 16 genotypes of the Mesoamerican diversity panel of dry beans. Annual Report of the Bean Improvement Cooperative 59: 81-82.

7. Identifying genomic regions associated with halo blight resistance within the USDA core collection of common bean. Annual Report of the Bean Improvement Cooperative 59: 111-113.

6. QTL mapping associated with morphological traits of bean seedlings and response to low temperature in germination. Annual Report of the Bean Improvement Cooperative 59: 189-191.

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2014:
5. Behind the scenes of the common bean genome. Annual Report of the Bean Improvement Cooperative 57: 9-11.

4. Molecular genetic analysis of the Phaseolus vulgaris P locus. Annual Report of the Bean Improvement Cooperative 57:15–16.

3. QTL mapping for drought tolerance using a RIL population of BUSTER x SER 22. Annual Report of the Bean Improvement Cooperative 57: 37-39.

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2012:
2. Mapping health related traits in the common bean genome. Annual Report of the Bean Improvement Cooperative 55: 225-227.

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2006:
1.DNA sequence polymorphisms among common bean genes. Annual Report of the Bean Improvement Cooperative 49: 143-144.

2015:
Molecular Markers in Entomological Research in Biological and Molecular Approaches in Pest Management, Scientific Publishers. Pages 161-201.